NEW YORK (Reuters) - The Environmental Protection Agency has exempted one of the nation's largest oil refining companies, Andeavor, from complying with U.S. biofuels regulations - a waiver historically reserved for tiny operations in danger of going belly up, two sources familiar with the matter told Reuters.

The exemption, which applies to the three smallest of Andeavor's ten refineries, marks the first evidence of the EPA freeing a highly profitable multi-billion dollar company from the costly mandates of the U.S. Renewable Fuel Standard. The law requires refiners to blend biofuels such as ethanol into gasoline or purchase credits from those who do such blending.

The decision, which has not been previously reported, raises the question of whether other big and profitable oil firms with small refineries - such as Exxon Mobil Corp , Chevron Corp (>> Chevron Corporation) and Phillips 66 - also have or could receive the waivers, which are granted by the EPA in secret.

Such waivers were designed for refineries producing less than 75,000 barrels per day that can demonstrate that they suffer a "disproportionate economic hardship" from the costs of RFS compliance.

Andeavor posted net profits of about $1.5 billion last year.

The EPA exemption, granted about a month ago, could reduce Andeavor's regulatory costs by more than $50 million this year, based on the number of biofuels credits that two brokers say the refiner recently sold into the market, along with previous disclosures by firms that own refineries of a similar size.

Biofuels credit prices tied to ethanol dropped by 6 cents, to 38 cents each, after Reuters reported Andeavor's exemption, traders said. Andeavor shares jumped by more than 1 percent on the news, hitting a session high of $102.78.

Bob Dinneen, head of the Renewable Fuels Association, reacted to the report by calling the exemption an "outrageous abuse" of the law.

"Providing a small refiner waiver to a company like Andeavor is laughable and abandons the commitment of President Trump to protect the RFS," he said in a statement.

U.S. Senator Chuck Grassley, a Republican who represents Iowa - the nation's largest corn-growing state - and a staunch defender of the biofuels program, raised questions over the legality of the exemption.

Giving Andeavor “a free pass when other companies are required to follow the law of the land isn’t just unfair, it may be illegal," Grassley said late Tuesday in a statement to Reuters. "It would also amount to a massive government handout to a big corporation that made billions in profits just last year."

The exemption releases the firm of its obligation to provide the EPA with biofuels credits proving compliance at the three refineries - two located in North Dakota and one in Utah - for the year 2016, which would have come due this year, the sources said. Andeavor is also asking EPA for a waiver for its 2017 obligations for the same refineries, but has not yet received a decision, the sources said.

Andeavor spokeswoman Destin Singleton declined to comment. EPA spokeswoman Liz Bowman did not immediately comment in response to Reuters inquiries on Monday and Tuesday.

As a matter of policy, the agency refuses to release any information on the waivers, or to name their recipients, citing concerns over disclosing private business information. The EPA denied a Freedom of Information Act request from Reuters seeking information on companies receiving the waivers.

Exxon Mobil, Chevron and Phillips 66 also own refineries small enough to meet the barrel-per-day standard, as does billionaire investor and Trump ally Carl Icahn - whose efforts last year to overhaul the biofuels program drew scrutiny from federal investigators.

Icahn, majority owner of refiner CVR Energy (>> CVR Energy, Inc.), had served as an advisor to Trump on regulatory issues during his push to reform biofuels regulations early last year, but he resigned amid allegations that the role gave him a conflict of interest.

Spokespeople for all four companies declined to comment on whether they had applied for or received any exemptions.

The lucrative waivers are typically only reported if a publicly-traded firm considers them to be material to their financial or operational performance, in which case they must disclose the information through Securities and Exchange Commission filings.

The RFS has long been a lightning rod of conflict between the corn lobby, which supports the policy as an engine for demand, and refiners who say it costs them a fortune.

The White House has sought to broker a deal between two of its key political constituencies in a series of meetings, but the effort has failed to yield policy changes acceptable to both sides.

Ethanol industry advocates argue exemptions for refiners undermine the intent of the law, originally designed to reduce greenhouse gas emissions, reduce dependence on foreign oil and boost farm economies.

While the EPA's motives in providing hardship waivers are unclear, the exemptions are one of the tools at the administration's disposal to ease financial pressure on refiners without undertaking a reform of the RFS policy.

EPA chief Scott Pruitt, appointed by Trump, has repeatedly said the RFS is too costly to oil refiners and should be overhauled. But Trump's Secretary of Agriculture, Sonny Perdue, told an agriculture conference in February that Trump "stands with corn farmers, biofuels farmers and the RFS," according to a recording heard by Reuters.

White House spokeswoman Kelly Love did not respond to a question about whether the administration was expanding the use of the RFS waivers to help refiners. Bowman, of the EPA, also did not comment on the question.

LAWSUIT OVER 'HARDSHIP' STANDARD

Andeavor's waiver follows a successful lawsuit by another refiner, Sinclair Oil, last year challenging the strict standard the EPA has used under past administrations for determining financial hardship.

"The EPA's interpretation takes the statutory language too far," wrote Chief Judge Timothy Tymkovich of the 10th Circuit Court of Appeals in Denver. "A 'hardship' is something that makes one's life hard or difficult - not just something that makes continued existence impossible."

The lawsuit - along with a perception that the Trump administration might be more sympathetic to refiners - has sparked a big increase in applications from refining firms for he exemptions this year. More than 30 refineries have sought the waivers, according to sources familiar with the matter.

In a typical year, the EPA would receive about 12 to 15 requests for hardship exemptions and would grant about half of them, a former official familiar with the program told Reuters.

EXEMPTIONS SAVE REFINERS BIG BUCKS

Andeavor sold some 100 million of those credits to its competitors in recent weeks, according to two brokers in the biofuels credit market. The company otherwise would have needed to provide those credits to the EPA to prove compliance with the RFS.

Those credits would be worth about $58 million based on a Reuters calculation of average renewable fuel RIN prices this year.

In the past, other companies have said the exemptions they were granted saved them tens of millions of dollars, according to Securities and Exchange Commission filings.

Last year, for example, HollyFrontier disclosed a reduction of almost $58 million in its costs of credits for two refineries for 2016.

Refiners granted exemptions win in two ways: They no longer have to blend biofuels or buy credits to comply with the law, and they can sell any credits they had previously purchased to use for compliance.

(Reporting by Jarrett Renshaw and Chris Prentice; Additional reporting by Jessica Resnick-Ault; Editing by Richard Valdmanis and Brian Thevenot)

By Jarrett Renshaw and Chris Prentice

Stocks treated in this article : Chevron Corporation, CVR Energy, Inc., Phillips 66, Andeavor